Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 HINT2P1-201ENST00000419438 481 ntBASIC14.02□□□□□ -0.17
RIPPLY3P57055 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 SNX29P1-201ENST00000548357 1007 ntBASIC14.02□□□□□ -0.17
RIPPLY3P57055 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RIPPLY3P57055 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIPPLY3P57055 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 PTCHD3P3-201ENST00000403073 906 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC234644.1-201ENST00000406065 370 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 MIR1247-201ENST00000408206 136 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SPCS2P4-201ENST00000436160 681 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 KRT18P65-201ENST00000439811 1286 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RN7SL837P-201ENST00000463010 287 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 AC243960.2-201ENST00000600996 747 ntBASIC14.01□□□□□ -0.17
RIPPLY3P57055 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIPPLY3P57055 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.01□□□□□ -0.17
RIPPLY3P57055 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 KRT8P32-201ENST00000512863 1461 ntBASIC14□□□□□ -0.17
RIPPLY3P57055 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms