Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.36□□□□□ -0.43
APOC4P55056 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC4P55056 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC4P55056 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.36□□□□□ -0.43
APOC4P55056 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.36□□□□□ -0.43
APOC4P55056 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC4P55056 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC4P55056 AP002472.1-201ENST00000577490 586 ntBASIC12.36□□□□□ -0.43
APOC4P55056 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 AC007613.1-201ENST00000572811 2597 ntBASIC12.36□□□□□ -0.43
APOC4P55056 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
APOC4P55056 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
APOC4P55056 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOC4P55056 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.35□□□□□ -0.43
APOC4P55056 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 CROCCP2-202ENST00000412962 2773 ntBASIC12.35□□□□□ -0.43
APOC4P55056 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.35□□□□□ -0.43
APOC4P55056 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 AC004835.2-201ENST00000603762 682 ntBASIC12.35□□□□□ -0.43
APOC4P55056 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.35□□□□□ -0.43
APOC4P55056 AL023806.1-201ENST00000603994 1649 ntBASIC12.35□□□□□ -0.43
APOC4P55056 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
APOC4P55056 FRMD8P1-201ENST00000440433 1524 ntBASIC12.35□□□□□ -0.43
APOC4P55056 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms