Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LBX1P52954 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LBX1P52954 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LBX1P52954 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LBX1P52954 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LBX1P52954 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LBX1P52954 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
LBX1P52954 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.76■□□□□ 0.59
LBX1P52954 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 AC007969.1-201ENST00000433675 447 ntBASIC18.76■□□□□ 0.59
LBX1P52954 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.76■□□□□ 0.59
LBX1P52954 RN7SL818P-201ENST00000485099 259 ntBASIC18.76■□□□□ 0.59
LBX1P52954 AC091804.1-201ENST00000486888 567 ntBASIC18.76■□□□□ 0.59
LBX1P52954 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.76■□□□□ 0.59
LBX1P52954 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.76■□□□□ 0.59
LBX1P52954 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.76■□□□□ 0.59
LBX1P52954 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.76■□□□□ 0.59
LBX1P52954 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.76■□□□□ 0.59
LBX1P52954 RN7SL725P-201ENST00000606439 259 ntBASIC18.76■□□□□ 0.59
LBX1P52954 AC244669.2-201ENST00000612320 853 ntBASIC18.76■□□□□ 0.59
LBX1P52954 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LBX1P52954 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LBX1P52954 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LBX1P52954 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LBX1P52954 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.75■□□□□ 0.59
LBX1P52954 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LBX1P52954 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.75■□□□□ 0.59
LBX1P52954 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 AL442647.2-201ENST00000429864 857 ntBASIC18.75■□□□□ 0.59
LBX1P52954 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.75■□□□□ 0.59
LBX1P52954 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LBX1P52954 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 CASP16P-204ENST00000635032 809 ntBASIC18.75■□□□□ 0.59
LBX1P52954 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LBX1P52954 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.75■□□□□ 0.59
LBX1P52954 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.75■□□□□ 0.59
LBX1P52954 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.75■□□□□ 0.59
LBX1P52954 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LBX1P52954 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
LBX1P52954 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LBX1P52954 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 FTLP1-201ENST00000449155 526 ntBASIC18.74■□□□□ 0.59
LBX1P52954 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms