Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
HMGA2P52926 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGA2P52926 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 ABCD1P5-201ENST00000445663 754 ntBASIC15.43■□□□□ 0.06
HMGA2P52926 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.43■□□□□ 0.06
HMGA2P52926 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.43■□□□□ 0.06
HMGA2P52926 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
HMGA2P52926 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 AC114341.1-201ENST00000618070 349 ntBASIC15.43■□□□□ 0.06
HMGA2P52926 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 AL121956.5-201ENST00000625261 221 ntBASIC15.43■□□□□ 0.06
HMGA2P52926 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGA2P52926 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HMGA2P52926 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGA2P52926 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HMGA2P52926 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 AL671710.1-201ENST00000610245 2349 ntBASIC15.43■□□□□ 0.06
HMGA2P52926 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGA2P52926 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGA2P52926 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGA2P52926 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.42■□□□□ 0.06
HMGA2P52926 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 TPSP2-201ENST00000561760 610 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 MIR4492-201ENST00000581627 80 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 LINC01023-201ENST00000606054 436 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 AC010331.1-201ENST00000611423 582 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGA2P52926 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGA2P52926 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 AL596257.1-201ENST00000641463 2694 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGA2P52926 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HMGA2P52926 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGA2P52926 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGA2P52926 KRT18P1-202ENST00000452408 1331 ntBASIC15.42■□□□□ 0.06
HMGA2P52926 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGA2P52926 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
HMGA2P52926 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGA2P52926 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGA2P52926 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGA2P52926 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HMGA2P52926 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 AL031133.1-201ENST00000406807 723 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms