Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
TUBP50607 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TUBP50607 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TUBP50607 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.8■□□□□ 0.44
TUBP50607 BCAR1-209ENST00000546196 1340 ntBASIC17.8■□□□□ 0.44
TUBP50607 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TUBP50607 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TUBP50607 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.8■□□□□ 0.44
TUBP50607 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.8■□□□□ 0.44
TUBP50607 YBX1P5-201ENST00000509441 847 ntBASIC17.8■□□□□ 0.44
TUBP50607 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.8■□□□□ 0.44
TUBP50607 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 C20orf181-201ENST00000623918 480 ntBASIC17.8■□□□□ 0.44
TUBP50607 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.8■□□□□ 0.44
TUBP50607 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBP50607 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TUBP50607 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TUBP50607 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 SLC25A1P3-201ENST00000395415 828 ntBASIC17.79■□□□□ 0.44
TUBP50607 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TUBP50607 MKNK2P1-201ENST00000437526 628 ntBASIC17.79■□□□□ 0.44
TUBP50607 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.79■□□□□ 0.44
TUBP50607 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.79■□□□□ 0.44
TUBP50607 AC107918.2-201ENST00000530817 355 ntBASIC17.79■□□□□ 0.44
TUBP50607 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.79■□□□□ 0.44
TUBP50607 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.79■□□□□ 0.44
TUBP50607 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBP50607 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBP50607 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms