Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 AC005104.2-201ENST00000427818 678 ntBASIC15.96■□□□□ 0.15
CLK1P49759 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK1P49759 AC104819.1-201ENST00000504587 486 ntBASIC15.96■□□□□ 0.15
CLK1P49759 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK1P49759 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK1P49759 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK1P49759 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CLK1P49759 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLK1P49759 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK1P49759 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.96■□□□□ 0.15
CLK1P49759 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK1P49759 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.96■□□□□ 0.14
CLK1P49759 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLK1P49759 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CLK1P49759 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CLK1P49759 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLK1P49759 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 AL365209.1-201ENST00000624418 6473 ntBASIC15.95■□□□□ 0.14
CLK1P49759 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 AC132872.4-202ENST00000622924 2756 ntBASIC15.95■□□□□ 0.14
CLK1P49759 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.95■□□□□ 0.14
CLK1P49759 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CLK1P49759 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLK1P49759 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CLK1P49759 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 IGHV3-47-201ENST00000425060 335 ntBASIC15.95■□□□□ 0.14
CLK1P49759 AC007967.3-201ENST00000434308 558 ntBASIC15.95■□□□□ 0.14
CLK1P49759 MINOS1P3-201ENST00000457048 203 ntBASIC15.95■□□□□ 0.14
CLK1P49759 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 AC007326.2-201ENST00000624224 7579 ntBASIC15.95■□□□□ 0.14
CLK1P49759 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CLK1P49759 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLK1P49759 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLK1P49759 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLK1P49759 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
CLK1P49759 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.94■□□□□ 0.14
CLK1P49759 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.94■□□□□ 0.14
CLK1P49759 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLK1P49759 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLK1P49759 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
CLK1P49759 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.94■□□□□ 0.14
CLK1P49759 AC005915.1-201ENST00000624912 2018 ntBASIC15.94■□□□□ 0.14
CLK1P49759 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.94■□□□□ 0.14
CLK1P49759 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CLK1P49759 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.94■□□□□ 0.14
CLK1P49759 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms