Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1EP49674 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1EP49674 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1EP49674 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1EP49674 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1EP49674 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1EP49674 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1EP49674 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1EP49674 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 KRT8P49-201ENST00000604166 1432 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 AC100757.3-201ENST00000622361 1406 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CSNK1EP49674 GK-202ENST00000378941 458 ntTSL 3 BASIC16.46■□□□□ 0.23
CSNK1EP49674 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 GAPDHP21-201ENST00000450301 1010 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.46■□□□□ 0.23
CSNK1EP49674 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.46■□□□□ 0.23
CSNK1EP49674 RARRES2P9-201ENST00000565168 469 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.46■□□□□ 0.23
CSNK1EP49674 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CSNK1EP49674 AC021097.1-201ENST00000607902 574 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CSNK1EP49674 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.46■□□□□ 0.23
CSNK1EP49674 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CSNK1EP49674 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.46■□□□□ 0.23
CSNK1EP49674 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 AP3S2-216ENST00000617003 1561 ntBASIC16.46■□□□□ 0.23
CSNK1EP49674 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1EP49674 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSNK1EP49674 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 FRMD8P1-201ENST00000440433 1524 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 MRPS18AP1-201ENST00000414458 589 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 AC142381.1-201ENST00000426099 345 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 CRB3P1-201ENST00000449338 276 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1EP49674 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1EP49674 AC105233.2-201ENST00000523697 349 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 AF228730.5-201ENST00000530288 346 ntBASIC16.45■□□□□ 0.22
CSNK1EP49674 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1EP49674 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.45■□□□□ 0.22
CSNK1EP49674 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1EP49674 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1EP49674 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1EP49674 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1EP49674 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1EP49674 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1EP49674 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1EP49674 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1EP49674 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1EP49674 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1EP49674 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms