Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.06■□□□□ 0
SRP9P49458 FAM220CP-201ENST00000395253 831 ntBASIC15.06■□□□□ 0
SRP9P49458 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
SRP9P49458 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.06■□□□□ 0
SRP9P49458 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.06■□□□□ 0
SRP9P49458 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.06■□□□□ 0
SRP9P49458 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.06■□□□□ 0
SRP9P49458 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.06■□□□□ 0
SRP9P49458 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SRP9P49458 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SRP9P49458 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SRP9P49458 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 DBET-201ENST00000630918 3363 ntBASIC15.06■□□□□ 0
SRP9P49458 AC005052.1-201ENST00000625181 2492 ntBASIC15.06■□□□□ 0
SRP9P49458 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.06■□□□□ 0
SRP9P49458 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SRP9P49458 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.06■□□□□ 0
SRP9P49458 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRP9P49458 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SRP9P49458 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.05■□□□□ 0
SRP9P49458 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.05■□□□□ 0
SRP9P49458 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.05■□□□□ 0
SRP9P49458 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.05■□□□□ 0
SRP9P49458 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.05■□□□□ 0
SRP9P49458 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SRP9P49458 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.05■□□□□ -0
SRP9P49458 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SRP9P49458 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.05■□□□□ -0
SRP9P49458 AC007967.3-201ENST00000434308 558 ntBASIC15.05■□□□□ -0
SRP9P49458 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.05■□□□□ -0
SRP9P49458 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.05■□□□□ -0
SRP9P49458 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.05■□□□□ -0
SRP9P49458 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.05■□□□□ -0
SRP9P49458 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.05■□□□□ -0
SRP9P49458 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.05■□□□□ -0
SRP9P49458 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.05■□□□□ -0
SRP9P49458 AL121772.3-201ENST00000610840 674 ntBASIC15.05■□□□□ -0
SRP9P49458 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.05■□□□□ -0
SRP9P49458 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.05■□□□□ -0
SRP9P49458 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 LINC02012-201ENST00000608206 1725 ntBASIC15.05■□□□□ -0
SRP9P49458 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SRP9P49458 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SRP9P49458 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.05■□□□□ -0
SRP9P49458 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRP9P49458 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRP9P49458 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.04■□□□□ -0
SRP9P49458 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.04■□□□□ -0
SRP9P49458 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.04■□□□□ -0
SRP9P49458 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.04■□□□□ -0
SRP9P49458 TP73-AS1-210ENST00000637775 1455 ntBASIC15.04■□□□□ -0
SRP9P49458 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 COX5BP2-201ENST00000392354 334 ntBASIC15.04■□□□□ -0
SRP9P49458 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRP9P49458 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.04■□□□□ -0
SRP9P49458 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.04■□□□□ -0
SRP9P49458 KRT16P4-201ENST00000453883 522 ntBASIC15.04■□□□□ -0
SRP9P49458 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms