Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 AK4P3-201ENST00000418260 669 ntBASIC16.66■□□□□ 0.26
SLC1A6P48664 AL645929.1-201ENST00000420084 975 ntBASIC16.66■□□□□ 0.26
SLC1A6P48664 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A6P48664 AC092647.4-201ENST00000457211 535 ntBASIC16.66■□□□□ 0.26
SLC1A6P48664 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A6P48664 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A6P48664 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC1A6P48664 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC1A6P48664 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC1A6P48664 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A6P48664 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC1A6P48664 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A6P48664 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A6P48664 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A6P48664 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC1A6P48664 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A6P48664 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A6P48664 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC1A6P48664 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A6P48664 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A6P48664 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A6P48664 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A6P48664 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A6P48664 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.64■□□□□ 0.26
SLC1A6P48664 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.64■□□□□ 0.26
SLC1A6P48664 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC1A6P48664 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC1A6P48664 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SLC1A6P48664 AC005521.1-201ENST00000393351 872 ntBASIC16.64■□□□□ 0.25
SLC1A6P48664 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC1A6P48664 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC1A6P48664 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC1A6P48664 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 AC011467.2-201ENST00000598425 242 ntBASIC16.64■□□□□ 0.25
SLC1A6P48664 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 AC006011.2-201ENST00000621313 1158 ntBASIC16.64■□□□□ 0.25
SLC1A6P48664 AC133561.5-201ENST00000635547 218 ntBASIC16.64■□□□□ 0.25
SLC1A6P48664 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A6P48664 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC1A6P48664 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC1A6P48664 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SLC1A6P48664 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SLC1A6P48664 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A6P48664 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms