Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
SOX2P48431 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SOX2P48431 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SOX2P48431 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SOX2P48431 AL645929.1-201ENST00000420084 975 ntBASIC14.93□□□□□ -0.02
SOX2P48431 AL845331.1-201ENST00000424978 1190 ntBASIC14.93□□□□□ -0.02
SOX2P48431 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.93□□□□□ -0.02
SOX2P48431 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.93□□□□□ -0.02
SOX2P48431 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.93□□□□□ -0.02
SOX2P48431 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.93□□□□□ -0.02
SOX2P48431 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 AC083849.1-201ENST00000615227 514 ntBASIC14.93□□□□□ -0.02
SOX2P48431 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
SOX2P48431 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SOX2P48431 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SOX2P48431 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 AC007950.2-201ENST00000615045 2347 ntBASIC14.93□□□□□ -0.02
SOX2P48431 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
SOX2P48431 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.93□□□□□ -0.02
SOX2P48431 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SOX2P48431 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SOX2P48431 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 KLF4P1-201ENST00000412782 1185 ntBASIC14.92□□□□□ -0.02
SOX2P48431 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.92□□□□□ -0.02
SOX2P48431 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.92□□□□□ -0.02
SOX2P48431 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.92□□□□□ -0.02
SOX2P48431 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 AC126755.1-201ENST00000525846 6405 ntBASIC14.92□□□□□ -0.02
SOX2P48431 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 AC132938.5-201ENST00000624980 1813 ntBASIC14.92□□□□□ -0.02
SOX2P48431 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.92□□□□□ -0.02
SOX2P48431 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.92□□□□□ -0.02
SOX2P48431 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SOX2P48431 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
SOX2P48431 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SOX2P48431 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SOX2P48431 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SOX2P48431 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.91□□□□□ -0.02
SOX2P48431 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SOX2P48431 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
SOX2P48431 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms