Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 ACTG1P4-201ENST00000425123 1122 ntBASIC17.61■□□□□ 0.41
MMP13P45452 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP13P45452 AC079781.3-201ENST00000449110 356 ntBASIC17.61■□□□□ 0.41
MMP13P45452 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP13P45452 AC021087.4-201ENST00000563761 564 ntBASIC17.61■□□□□ 0.41
MMP13P45452 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP13P45452 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP13P45452 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP13P45452 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MMP13P45452 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 AC132872.4-202ENST00000622924 2756 ntBASIC17.61■□□□□ 0.41
MMP13P45452 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MMP13P45452 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MMP13P45452 LINC00982-205ENST00000420957 435 ntBASIC17.6■□□□□ 0.41
MMP13P45452 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.6■□□□□ 0.41
MMP13P45452 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.6■□□□□ 0.41
MMP13P45452 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.6■□□□□ 0.41
MMP13P45452 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 TP73-AS1-207ENST00000624167 988 ntBASIC17.6■□□□□ 0.41
MMP13P45452 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MMP13P45452 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MMP13P45452 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP13P45452 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP13P45452 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.59■□□□□ 0.41
MMP13P45452 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 NCF1C-201ENST00000438382 1427 ntBASIC17.59■□□□□ 0.41
MMP13P45452 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP13P45452 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms