Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 AL391005.1-201ENST00000623953 2435 ntBASIC17.68■□□□□ 0.42
SLC1A1P43005 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 SART3-203ENST00000546611 1184 ntBASIC17.68■□□□□ 0.42
SLC1A1P43005 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A1P43005 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A1P43005 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 MTDHP4-201ENST00000600287 670 ntBASIC17.68■□□□□ 0.42
SLC1A1P43005 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC1A1P43005 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
SLC1A1P43005 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A1P43005 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 AL513523.2-202ENST00000427283 2040 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 MIR1224-201ENST00000408193 85 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC1A1P43005 HCG4P8-203ENST00000443049 980 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A1P43005 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC1A1P43005 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC1A1P43005 AC091304.2-201ENST00000564639 760 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC1A1P43005 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 MPDU1-223ENST00000582151 728 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 AC008608.2-201ENST00000606089 416 ntBASIC17.67■□□□□ 0.42
SLC1A1P43005 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A1P43005 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A1P43005 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A1P43005 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A1P43005 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A1P43005 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC1A1P43005 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 AC087163.2-201ENST00000457299 853 ntBASIC17.66■□□□□ 0.42
SLC1A1P43005 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC1A1P43005 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC1A1P43005 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms