Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFSF9P41273 MKNK2P1-201ENST00000437526 628 ntBASIC18.22■□□□□ 0.51
TNFSF9P41273 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFSF9P41273 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFSF9P41273 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
TNFSF9P41273 AC013467.2-201ENST00000605472 835 ntBASIC18.22■□□□□ 0.51
TNFSF9P41273 GPALPP1-207ENST00000611650 899 ntBASIC18.22■□□□□ 0.51
TNFSF9P41273 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFSF9P41273 AC106886.4-201ENST00000623557 2502 ntBASIC18.22■□□□□ 0.51
TNFSF9P41273 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNFSF9P41273 AC078925.2-201ENST00000624013 1973 ntBASIC18.22■□□□□ 0.51
TNFSF9P41273 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TNFSF9P41273 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFSF9P41273 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TNFSF9P41273 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFSF9P41273 ELL2P1-201ENST00000413990 1906 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFSF9P41273 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFSF9P41273 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 CEND1P1-201ENST00000451006 455 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.21■□□□□ 0.51
TNFSF9P41273 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 AL009183.1-201ENST00000603760 355 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 AL031055.1-201ENST00000606362 631 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 AP001350.2-201ENST00000625104 1094 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 AC134684.3-201ENST00000641758 218 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNFSF9P41273 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 AL603756.1-201ENST00000606511 2163 ntBASIC18.21■□□□□ 0.51
TNFSF9P41273 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFSF9P41273 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNFSF9P41273 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFSF9P41273 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TNFSF9P41273 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFSF9P41273 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
TNFSF9P41273 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.2■□□□□ 0.5
TNFSF9P41273 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFSF9P41273 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFSF9P41273 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFSF9P41273 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFSF9P41273 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFSF9P41273 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFSF9P41273 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFSF9P41273 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFSF9P41273 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFSF9P41273 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFSF9P41273 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.2■□□□□ 0.5
TNFSF9P41273 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.2■□□□□ 0.5
TNFSF9P41273 AC112191.1-201ENST00000523689 701 ntBASIC18.2■□□□□ 0.5
TNFSF9P41273 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TNFSF9P41273 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFSF9P41273 AL691403.2-201ENST00000618460 490 ntBASIC18.2■□□□□ 0.5
TNFSF9P41273 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms