Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.47■□□□□ 0.55
USP8P40818 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.47■□□□□ 0.55
USP8P40818 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.47■□□□□ 0.55
USP8P40818 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
USP8P40818 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
USP8P40818 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.47■□□□□ 0.55
USP8P40818 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USP8P40818 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.47■□□□□ 0.55
USP8P40818 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.46■□□□□ 0.55
USP8P40818 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 TSPY19P-201ENST00000418461 509 ntBASIC18.46■□□□□ 0.55
USP8P40818 TSPY18P-201ENST00000441642 509 ntBASIC18.46■□□□□ 0.55
USP8P40818 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.46■□□□□ 0.55
USP8P40818 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 CLEC4GP1-201ENST00000596555 870 ntBASIC18.46■□□□□ 0.55
USP8P40818 LINC01711-201ENST00000598340 967 ntBASIC18.46■□□□□ 0.55
USP8P40818 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 SIGLEC16-201ENST00000599858 1437 ntBASIC18.46■□□□□ 0.55
USP8P40818 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.46■□□□□ 0.55
USP8P40818 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP8P40818 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP8P40818 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.46■□□□□ 0.54
USP8P40818 GPR89P-201ENST00000407924 1495 ntBASIC18.46■□□□□ 0.54
USP8P40818 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
USP8P40818 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
USP8P40818 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USP8P40818 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP8P40818 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
USP8P40818 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 AC105020.1-201ENST00000435356 2205 ntBASIC18.45■□□□□ 0.54
USP8P40818 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP8P40818 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.45■□□□□ 0.54
USP8P40818 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP8P40818 KRT18P56-201ENST00000507275 550 ntBASIC18.45■□□□□ 0.54
USP8P40818 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.45■□□□□ 0.54
USP8P40818 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms