Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
KRT20P35900 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.13■□□□□ 0.17
KRT20P35900 AC046185.3-201ENST00000623228 1824 ntBASIC16.13■□□□□ 0.17
KRT20P35900 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
KRT20P35900 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 AL020989.1-201ENST00000422979 469 ntBASIC16.13■□□□□ 0.17
KRT20P35900 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT20P35900 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT20P35900 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT20P35900 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 LYSMD4-203ENST00000378904 2122 ntBASIC16.13■□□□□ 0.17
KRT20P35900 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT20P35900 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
KRT20P35900 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 PCDHA1-201ENST00000378133 2726 ntBASIC16.12■□□□□ 0.17
KRT20P35900 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 AP005117.1-201ENST00000584346 1413 ntBASIC16.12■□□□□ 0.17
KRT20P35900 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 SAPCD2P3-201ENST00000455031 850 ntBASIC16.12■□□□□ 0.17
KRT20P35900 SIGLEC30P-201ENST00000455569 941 ntBASIC16.12■□□□□ 0.17
KRT20P35900 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.12■□□□□ 0.17
KRT20P35900 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
KRT20P35900 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT20P35900 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT20P35900 AP000867.4-201ENST00000641616 219 ntBASIC16.12■□□□□ 0.17
KRT20P35900 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT20P35900 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KRT20P35900 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 PMPCAP1-201ENST00000508114 1576 ntBASIC16.12■□□□□ 0.17
KRT20P35900 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT20P35900 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT20P35900 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
KRT20P35900 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 AL450487.1-201ENST00000426799 995 ntBASIC16.11■□□□□ 0.17
KRT20P35900 DUSP5P1-201ENST00000441325 1139 ntBASIC16.11■□□□□ 0.17
KRT20P35900 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 SCARNA2-201ENST00000458748 420 ntBASIC16.11■□□□□ 0.17
KRT20P35900 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT20P35900 MTDHP3-201ENST00000594186 672 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms