Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 LINC00895-201ENST00000629028 1637 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 SNX33P1-201ENST00000592116 1762 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A4P31645 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC6A4P31645 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC6A4P31645 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC6A4P31645 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A4P31645 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC6A4P31645 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A4P31645 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.27■□□□□ 0.36
SLC6A4P31645 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A4P31645 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 AL671277.1-201ENST00000429656 993 ntBASIC17.27■□□□□ 0.36
SLC6A4P31645 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A4P31645 AC109635.5-201ENST00000533593 962 ntBASIC17.27■□□□□ 0.36
SLC6A4P31645 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A4P31645 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A4P31645 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC6A4P31645 AC105339.1-204ENST00000636249 355 ntBASIC17.27■□□□□ 0.36
SLC6A4P31645 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A4P31645 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SLC6A4P31645 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC6A4P31645 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A4P31645 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SLC6A4P31645 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC6A4P31645 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC6A4P31645 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 KRT8P48-201ENST00000515599 1220 ntBASIC17.26■□□□□ 0.35
SLC6A4P31645 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC6A4P31645 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A4P31645 AL513210.1-201ENST00000629608 234 ntBASIC17.26■□□□□ 0.35
SLC6A4P31645 AC079781.4-201ENST00000641908 219 ntBASIC17.26■□□□□ 0.35
SLC6A4P31645 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC6A4P31645 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A4P31645 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A4P31645 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A4P31645 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC6A4P31645 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SLC6A4P31645 AC105020.1-201ENST00000435356 2205 ntBASIC17.25■□□□□ 0.35
SLC6A4P31645 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC6A4P31645 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms