Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.26□□□□□ -0.13
COL8A2P25067 CNN2P11-201ENST00000429351 262 ntBASIC14.26□□□□□ -0.13
COL8A2P25067 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 ACTG1P14-201ENST00000446382 1122 ntBASIC14.26□□□□□ -0.13
COL8A2P25067 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.26□□□□□ -0.13
COL8A2P25067 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.26□□□□□ -0.13
COL8A2P25067 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.26□□□□□ -0.13
COL8A2P25067 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.26□□□□□ -0.13
COL8A2P25067 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.26□□□□□ -0.13
COL8A2P25067 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COL8A2P25067 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 FRMD8P1-201ENST00000440433 1524 ntBASIC14.25□□□□□ -0.13
COL8A2P25067 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
COL8A2P25067 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 HMGA1P7-201ENST00000406908 502 ntBASIC14.25□□□□□ -0.13
COL8A2P25067 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.25□□□□□ -0.13
COL8A2P25067 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
COL8A2P25067 AC112191.1-201ENST00000523689 701 ntBASIC14.25□□□□□ -0.13
COL8A2P25067 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.25□□□□□ -0.13
COL8A2P25067 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 AC005412.3-201ENST00000580309 715 ntBASIC14.25□□□□□ -0.13
COL8A2P25067 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.25□□□□□ -0.13
COL8A2P25067 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms