Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DUX4L17-201ENST00000557360 1267 ntBASIC18.41■□□□□ 0.54
RFX1P22670 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 AC005593.1-201ENST00000624894 515 ntBASIC18.41■□□□□ 0.54
RFX1P22670 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX1P22670 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 AL021920.2-201ENST00000624828 1351 ntBASIC18.41■□□□□ 0.54
RFX1P22670 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.41■□□□□ 0.54
RFX1P22670 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX1P22670 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX1P22670 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
RFX1P22670 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.4■□□□□ 0.54
RFX1P22670 LAGE3P1-201ENST00000425356 484 ntBASIC18.4■□□□□ 0.54
RFX1P22670 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX1P22670 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.4■□□□□ 0.54
RFX1P22670 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
RFX1P22670 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 NKAPP1-205ENST00000585790 367 ntBASIC18.4■□□□□ 0.54
RFX1P22670 AL589182.2-201ENST00000619332 1049 ntBASIC18.4■□□□□ 0.54
RFX1P22670 AC107918.4-202ENST00000641623 219 ntBASIC18.4■□□□□ 0.54
RFX1P22670 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.4■□□□□ 0.54
RFX1P22670 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RFX1P22670 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RFX1P22670 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX1P22670 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX1P22670 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFX1P22670 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RFX1P22670 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RFX1P22670 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RFX1P22670 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
RFX1P22670 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX1P22670 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 AL118508.1-201ENST00000613502 2345 ntBASIC18.39■□□□□ 0.53
RFX1P22670 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RFX1P22670 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RFX1P22670 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFX1P22670 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX1P22670 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RFX1P22670 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RFX1P22670 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RFX1P22670 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RFX1P22670 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms