Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 SLC25A1P3-201ENST00000395415 828 ntBASIC15.72■□□□□ 0.11
PRKCAP17252 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.72■□□□□ 0.11
PRKCAP17252 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.72■□□□□ 0.11
PRKCAP17252 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.72■□□□□ 0.11
PRKCAP17252 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 AL691432.3-201ENST00000621860 400 ntBASIC15.72■□□□□ 0.11
PRKCAP17252 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRKCAP17252 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRKCAP17252 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKCAP17252 LINC02228-204ENST00000642115 2962 ntBASIC15.72■□□□□ 0.11
PRKCAP17252 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 AC093525.9-201ENST00000624961 1746 ntBASIC15.71■□□□□ 0.11
PRKCAP17252 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRKCAP17252 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCAP17252 AC004870.1-201ENST00000315132 882 ntBASIC15.71■□□□□ 0.11
PRKCAP17252 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.71■□□□□ 0.11
PRKCAP17252 ACTG1P4-201ENST00000425123 1122 ntBASIC15.71■□□□□ 0.11
PRKCAP17252 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCAP17252 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.71■□□□□ 0.11
PRKCAP17252 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCAP17252 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PRKCAP17252 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRKCAP17252 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.71■□□□□ 0.11
PRKCAP17252 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PRKCAP17252 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCAP17252 AC097637.2-201ENST00000624096 1997 ntBASIC15.71■□□□□ 0.1
PRKCAP17252 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCAP17252 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.1
PRKCAP17252 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
PRKCAP17252 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCAP17252 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.7■□□□□ 0.1
PRKCAP17252 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRKCAP17252 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 AL121912.1-201ENST00000603683 238 ntBASIC15.7■□□□□ 0.1
PRKCAP17252 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRKCAP17252 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms