Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
UBCP0CG48 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
UBCP0CG48 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 AL031133.1-201ENST00000406807 723 ntBASIC14.87□□□□□ -0.03
UBCP0CG48 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 DRAXINP1-201ENST00000437611 948 ntBASIC14.87□□□□□ -0.03
UBCP0CG48 NUS1P1-201ENST00000446295 882 ntBASIC14.87□□□□□ -0.03
UBCP0CG48 TSSC2-201ENST00000450217 709 ntBASIC14.87□□□□□ -0.03
UBCP0CG48 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
UBCP0CG48 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.87□□□□□ -0.03
UBCP0CG48 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.87□□□□□ -0.03
UBCP0CG48 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 AC022188.1-201ENST00000620960 1664 ntBASIC14.87□□□□□ -0.03
UBCP0CG48 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBCP0CG48 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBCP0CG48 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBCP0CG48 AL391256.1-201ENST00000443260 1855 ntBASIC14.86□□□□□ -0.03
UBCP0CG48 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UBCP0CG48 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 KRT17P6-201ENST00000453795 1220 ntBASIC14.86□□□□□ -0.03
UBCP0CG48 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.86□□□□□ -0.03
UBCP0CG48 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.86□□□□□ -0.03
UBCP0CG48 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.86□□□□□ -0.03
UBCP0CG48 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.86□□□□□ -0.03
UBCP0CG48 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms