Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.88■■□□□ 1.09
COL5A2P05997 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.88■■□□□ 1.09
COL5A2P05997 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.88■■□□□ 1.09
COL5A2P05997 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.88■■□□□ 1.09
COL5A2P05997 AC093724.1-201ENST00000448659 1027 ntBASIC21.88■■□□□ 1.09
COL5A2P05997 KRT223P-202ENST00000449164 1292 ntBASIC21.88■■□□□ 1.09
COL5A2P05997 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL5A2P05997 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.88■■□□□ 1.09
COL5A2P05997 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 AL109936.8-201ENST00000641772 604 ntBASIC21.88■■□□□ 1.09
COL5A2P05997 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.88■■□□□ 1.09
COL5A2P05997 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
COL5A2P05997 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL5A2P05997 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL5A2P05997 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A2P05997 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.87■■□□□ 1.09
COL5A2P05997 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
COL5A2P05997 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A2P05997 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 COX11-210ENST00000639671 696 ntBASIC21.87■■□□□ 1.09
COL5A2P05997 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A2P05997 TUBB8P12-201ENST00000308911 1335 ntBASIC21.87■■□□□ 1.09
COL5A2P05997 TUBB7P-202ENST00000428444 1305 ntBASIC21.87■■□□□ 1.09
COL5A2P05997 TUBB8P7-204ENST00000567960 1332 ntBASIC21.87■■□□□ 1.09
COL5A2P05997 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A2P05997 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL5A2P05997 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 AC234783.1-201ENST00000441761 496 ntBASIC21.86■■□□□ 1.09
COL5A2P05997 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.86■■□□□ 1.09
COL5A2P05997 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.86■■□□□ 1.09
COL5A2P05997 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
COL5A2P05997 AC093726.1-201ENST00000608064 963 ntBASIC21.86■■□□□ 1.09
COL5A2P05997 WFDC1-204ENST00000613603 549 ntBASIC21.86■■□□□ 1.09
COL5A2P05997 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.86■■□□□ 1.09
COL5A2P05997 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
COL5A2P05997 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 NOC2LP1-202ENST00000452600 2235 ntBASIC21.86■■□□□ 1.09
COL5A2P05997 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
COL5A2P05997 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A2P05997 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.85■■□□□ 1.09
COL5A2P05997 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.85■■□□□ 1.09
COL5A2P05997 AC092337.1-201ENST00000568699 1129 ntBASIC21.85■■□□□ 1.09
COL5A2P05997 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.85■■□□□ 1.09
COL5A2P05997 RPSAP52-203ENST00000622976 1023 ntBASIC21.85■■□□□ 1.09
COL5A2P05997 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.85■■□□□ 1.09
COL5A2P05997 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.85■■□□□ 1.09
COL5A2P05997 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.85■■□□□ 1.09
COL5A2P05997 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A2P05997 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.85■■□□□ 1.09
COL5A2P05997 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.85■■□□□ 1.09
COL5A2P05997 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 FAM86MP-201ENST00000340703 885 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms