Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TIMP1P01033 ABALON-201ENST00000629058 1903 ntBASIC18.04■□□□□ 0.48
TIMP1P01033 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TIMP1P01033 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.04■□□□□ 0.48
TIMP1P01033 AC234783.1-201ENST00000441761 496 ntBASIC18.04■□□□□ 0.48
TIMP1P01033 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.04■□□□□ 0.48
TIMP1P01033 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 ELK1P1-201ENST00000485699 580 ntBASIC18.04■□□□□ 0.48
TIMP1P01033 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 AC092552.1-201ENST00000547243 906 ntBASIC18.04■□□□□ 0.48
TIMP1P01033 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.04■□□□□ 0.48
TIMP1P01033 MIR4525-201ENST00000580000 75 ntBASIC18.04■□□□□ 0.48
TIMP1P01033 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.04■□□□□ 0.48
TIMP1P01033 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 REXO1L6P-201ENST00000603433 1515 ntBASIC18.03■□□□□ 0.48
TIMP1P01033 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.03■□□□□ 0.48
TIMP1P01033 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.03■□□□□ 0.48
TIMP1P01033 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 KRT223P-202ENST00000449164 1292 ntBASIC18.03■□□□□ 0.48
TIMP1P01033 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.03■□□□□ 0.48
TIMP1P01033 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.03■□□□□ 0.48
TIMP1P01033 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 AC133552.6-201ENST00000613406 534 ntBASIC18.03■□□□□ 0.48
TIMP1P01033 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.03■□□□□ 0.48
TIMP1P01033 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TIMP1P01033 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.03■□□□□ 0.48
TIMP1P01033 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.03■□□□□ 0.48
TIMP1P01033 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TIMP1P01033 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
TIMP1P01033 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 FAM86MP-201ENST00000340703 885 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.02■□□□□ 0.48
TIMP1P01033 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 TMEM14DP-201ENST00000422205 345 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.02■□□□□ 0.48
TIMP1P01033 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.02■□□□□ 0.48
TIMP1P01033 SDHAP3-202ENST00000515467 728 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.02■□□□□ 0.48
TIMP1P01033 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TIMP1P01033 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.02■□□□□ 0.48
TIMP1P01033 AC123567.1-201ENST00000548294 1261 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC023310.3-201ENST00000557027 670 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC100756.1-201ENST00000562736 682 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC108860.2-201ENST00000562760 2183 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC138749.3-201ENST00000567691 622 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC116165.1-201ENST00000611806 668 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TIMP1P01033 MIR6775-201ENST00000617557 69 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 AC004461.2-201ENST00000629517 803 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms