Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGA12O60330 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA12O60330 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGA12O60330 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AL135999.2-201ENST00000622438 1686 ntBASIC16.76■□□□□ 0.27
PCDHGA12O60330 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AL671277.1-201ENST00000429656 993 ntBASIC16.76■□□□□ 0.27
PCDHGA12O60330 AC140658.5-201ENST00000438532 169 ntBASIC16.76■□□□□ 0.27
PCDHGA12O60330 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AC093520.2-201ENST00000561830 333 ntBASIC16.76■□□□□ 0.27
PCDHGA12O60330 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA12O60330 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA12O60330 AC046185.3-201ENST00000623228 1824 ntBASIC16.75■□□□□ 0.27
PCDHGA12O60330 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.75■□□□□ 0.27
PCDHGA12O60330 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 AC087163.2-201ENST00000457299 853 ntBASIC16.75■□□□□ 0.27
PCDHGA12O60330 SLC25A6P2-201ENST00000497974 877 ntBASIC16.75■□□□□ 0.27
PCDHGA12O60330 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA12O60330 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA12O60330 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms