Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCL13O43927 AC074386.1-202ENST00000463561 864 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCL13O43927 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
CXCL13O43927 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCL13O43927 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCL13O43927 MPDU1-223ENST00000582151 728 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCL13O43927 MTDHP5-201ENST00000598980 586 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.11■□□□□ 0.01
CXCL13O43927 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.11■□□□□ 0.01
CXCL13O43927 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 SLC22A20-204ENST00000530038 1673 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.11■□□□□ 0.01
CXCL13O43927 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 AC012569.1-201ENST00000591191 1524 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CXCL13O43927 PCDHB17P-201ENST00000539533 2393 ntBASIC15.11■□□□□ 0.01
CXCL13O43927 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CXCL13O43927 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCL13O43927 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCL13O43927 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 AC131009.4-201ENST00000624048 1740 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 MCCD1P2-201ENST00000423228 335 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 DNAJB3-201ENST00000446806 729 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 AL031432.2-201ENST00000566714 459 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 AL928711.1-201ENST00000570165 459 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 AC010327.4-202ENST00000591484 748 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 AL645728.2-201ENST00000641974 660 ntBASIC15.1■□□□□ 0.01
CXCL13O43927 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCL13O43927 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCL13O43927 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCL13O43927 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 HCG4-201ENST00000418983 998 ntBASIC15.09■□□□□ 0.01
CXCL13O43927 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCL13O43927 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCL13O43927 AC087641.1-201ENST00000557561 1021 ntBASIC15.09■□□□□ 0.01
CXCL13O43927 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.09■□□□□ 0.01
CXCL13O43927 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.09■□□□□ 0.01
CXCL13O43927 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.09■□□□□ 0.01
CXCL13O43927 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.09■□□□□ 0.01
CXCL13O43927 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.09■□□□□ 0.01
CXCL13O43927 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CXCL13O43927 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCL13O43927 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms