Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 AC140658.5-201ENST00000438532 169 ntBASIC16.18■□□□□ 0.18
PRICKLE3O43900 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 AP002472.1-201ENST00000577490 586 ntBASIC16.18■□□□□ 0.18
PRICKLE3O43900 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 MTDHP5-201ENST00000598980 586 ntBASIC16.18■□□□□ 0.18
PRICKLE3O43900 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 AC092919.2-201ENST00000623631 1645 ntBASIC16.18■□□□□ 0.18
PRICKLE3O43900 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 AC078925.2-201ENST00000624013 1973 ntBASIC16.18■□□□□ 0.18
PRICKLE3O43900 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE3O43900 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE3O43900 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.17■□□□□ 0.18
PRICKLE3O43900 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AC092865.5-201ENST00000545435 363 ntBASIC16.17■□□□□ 0.18
PRICKLE3O43900 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AP001350.2-201ENST00000625104 1094 ntBASIC16.17■□□□□ 0.18
PRICKLE3O43900 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 AC020916.1-201ENST00000587762 1774 ntBASIC16.17■□□□□ 0.18
PRICKLE3O43900 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 RNF216P1-203ENST00000404404 2427 ntBASIC16.17■□□□□ 0.18
PRICKLE3O43900 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE3O43900 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE3O43900 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 AL671710.1-201ENST00000610245 2349 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 RNU1-129P-201ENST00000384064 167 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 MIR1233-2-201ENST00000408138 82 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 MIR1233-1-201ENST00000408722 82 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms