Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MIR3687-2-201ENST00000577708 61 ntBASIC17.51■□□□□ 0.39
MSI1O43347 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.51■□□□□ 0.39
MSI1O43347 AC006538.3-201ENST00000612495 578 ntBASIC17.51■□□□□ 0.39
MSI1O43347 MIR3687-1-201ENST00000614492 61 ntBASIC17.51■□□□□ 0.39
MSI1O43347 AC139530.3-201ENST00000620344 690 ntBASIC17.51■□□□□ 0.39
MSI1O43347 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.51■□□□□ 0.39
MSI1O43347 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MSI1O43347 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSI1O43347 PRORSD1P-202ENST00000563365 2154 ntBASIC17.5■□□□□ 0.39
MSI1O43347 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.5■□□□□ 0.39
MSI1O43347 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.5■□□□□ 0.39
MSI1O43347 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.5■□□□□ 0.39
MSI1O43347 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.5■□□□□ 0.39
MSI1O43347 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.5■□□□□ 0.39
MSI1O43347 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.5■□□□□ 0.39
MSI1O43347 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.5■□□□□ 0.39
MSI1O43347 AC087641.1-201ENST00000557561 1021 ntBASIC17.5■□□□□ 0.39
MSI1O43347 AP002472.1-201ENST00000577490 586 ntBASIC17.5■□□□□ 0.39
MSI1O43347 C20orf181-201ENST00000623918 480 ntBASIC17.5■□□□□ 0.39
MSI1O43347 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
MSI1O43347 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MSI1O43347 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.5■□□□□ 0.39
MSI1O43347 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSI1O43347 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.49■□□□□ 0.39
MSI1O43347 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 HCG4-201ENST00000418983 998 ntBASIC17.49■□□□□ 0.39
MSI1O43347 HTR5BP-201ENST00000430851 1154 ntBASIC17.49■□□□□ 0.39
MSI1O43347 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.49■□□□□ 0.39
MSI1O43347 MIR4492-201ENST00000581627 80 ntBASIC17.49■□□□□ 0.39
MSI1O43347 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
MSI1O43347 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.49■□□□□ 0.39
MSI1O43347 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
MSI1O43347 AC105020.1-201ENST00000435356 2205 ntBASIC17.49■□□□□ 0.39
MSI1O43347 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MSI1O43347 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MSI1O43347 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 AL645728.1-201ENST00000366221 2101 ntBASIC17.48■□□□□ 0.39
MSI1O43347 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MSI1O43347 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms