Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PFDN6O15212 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
PFDN6O15212 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 AL162727.3-201ENST00000635661 2787 ntBASIC16.96■□□□□ 0.31
PFDN6O15212 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN6O15212 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.96■□□□□ 0.31
PFDN6O15212 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.96■□□□□ 0.31
PFDN6O15212 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 AC073648.2-201ENST00000510116 352 ntBASIC16.96■□□□□ 0.31
PFDN6O15212 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.96■□□□□ 0.31
PFDN6O15212 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN6O15212 SART3-203ENST00000546611 1184 ntBASIC16.96■□□□□ 0.31
PFDN6O15212 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 IFNL4P1-201ENST00000607083 540 ntBASIC16.96■□□□□ 0.31
PFDN6O15212 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN6O15212 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PFDN6O15212 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN6O15212 AC106886.4-201ENST00000623557 2502 ntBASIC16.96■□□□□ 0.3
PFDN6O15212 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PFDN6O15212 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PFDN6O15212 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PFDN6O15212 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN6O15212 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PFDN6O15212 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PFDN6O15212 AC243591.1-201ENST00000452967 1364 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN6O15212 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PFDN6O15212 LAGE3P1-201ENST00000425356 484 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.95■□□□□ 0.3
PFDN6O15212 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.95■□□□□ 0.3
PFDN6O15212 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PFDN6O15212 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN6O15212 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN6O15212 TERC-201ENST00000602385 541 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 AC004706.3-202ENST00000621574 984 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 AF228730.7-201ENST00000641842 219 ntBASIC16.95■□□□□ 0.3
PFDN6O15212 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PFDN6O15212 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN6O15212 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PFDN6O15212 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN6O15212 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.94■□□□□ 0.3
PFDN6O15212 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN6O15212 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.94■□□□□ 0.3
PFDN6O15212 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.94■□□□□ 0.3
PFDN6O15212 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN6O15212 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN6O15212 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN6O15212 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PFDN6O15212 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms