Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 MIR3619-201ENST00000579667 83 ntBASIC18.04■□□□□ 0.48
CEP290O15078 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.04■□□□□ 0.48
CEP290O15078 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.04■□□□□ 0.48
CEP290O15078 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
CEP290O15078 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CEP290O15078 EIF4HP1-201ENST00000453115 687 ntBASIC18.04■□□□□ 0.48
CEP290O15078 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.04■□□□□ 0.48
CEP290O15078 RN7SL769P-201ENST00000469386 295 ntBASIC18.04■□□□□ 0.48
CEP290O15078 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.04■□□□□ 0.48
CEP290O15078 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CEP290O15078 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 LINC00895-201ENST00000629028 1637 ntBASIC18.03■□□□□ 0.48
CEP290O15078 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.03■□□□□ 0.48
CEP290O15078 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CEP290O15078 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.03■□□□□ 0.48
CEP290O15078 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.03■□□□□ 0.48
CEP290O15078 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 MIR5189-201ENST00000577370 114 ntBASIC18.03■□□□□ 0.48
CEP290O15078 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.03■□□□□ 0.48
CEP290O15078 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.03■□□□□ 0.48
CEP290O15078 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.03■□□□□ 0.48
CEP290O15078 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.03■□□□□ 0.48
CEP290O15078 AC079316.1-201ENST00000548397 411 ntBASIC18.03■□□□□ 0.48
CEP290O15078 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.03■□□□□ 0.48
CEP290O15078 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.03■□□□□ 0.48
CEP290O15078 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.03■□□□□ 0.48
CEP290O15078 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CEP290O15078 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.02■□□□□ 0.48
CEP290O15078 CHMP4BP1-201ENST00000556017 588 ntBASIC18.02■□□□□ 0.48
CEP290O15078 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.02■□□□□ 0.48
CEP290O15078 MIR4492-201ENST00000581627 80 ntBASIC18.02■□□□□ 0.48
CEP290O15078 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.02■□□□□ 0.48
CEP290O15078 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.02■□□□□ 0.48
CEP290O15078 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CEP290O15078 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CEP290O15078 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.02■□□□□ 0.48
CEP290O15078 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CEP290O15078 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CEP290O15078 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CEP290O15078 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CEP290O15078 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CEP290O15078 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CEP290O15078 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CEP290O15078 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CEP290O15078 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CEP290O15078 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CEP290O15078 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 AC138627.1-207ENST00000641560 1006 ntBASIC18.01■□□□□ 0.47
CEP290O15078 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.01■□□□□ 0.47
CEP290O15078 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.01■□□□□ 0.47
CEP290O15078 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 KRT8P22-201ENST00000562317 1415 ntBASIC18.01■□□□□ 0.47
CEP290O15078 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CEP290O15078 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CEP290O15078 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEP290O15078 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.01■□□□□ 0.47
CEP290O15078 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.01■□□□□ 0.47
CEP290O15078 MIR7845-201ENST00000618396 99 ntBASIC18.01■□□□□ 0.47
CEP290O15078 AC004461.2-201ENST00000629517 803 ntBASIC18.01■□□□□ 0.47
CEP290O15078 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.01■□□□□ 0.47
CEP290O15078 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.01■□□□□ 0.47
CEP290O15078 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CEP290O15078 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.01■□□□□ 0.47
CEP290O15078 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms