Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
SLC28A1O00337 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A1O00337 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SLC28A1O00337 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC28A1O00337 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.29■□□□□ 0.2
SLC28A1O00337 AC064862.7-201ENST00000604520 867 ntBASIC16.29■□□□□ 0.2
SLC28A1O00337 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC28A1O00337 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC28A1O00337 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A1O00337 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
SLC28A1O00337 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC28A1O00337 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A1O00337 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A1O00337 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A1O00337 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A1O00337 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AC026691.1-201ENST00000602502 2017 ntBASIC16.28■□□□□ 0.2
SLC28A1O00337 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 RBM17P3-201ENST00000417687 1192 ntBASIC16.28■□□□□ 0.2
SLC28A1O00337 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A1O00337 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC28A1O00337 AL139288.1-201ENST00000623748 933 ntBASIC16.28■□□□□ 0.2
SLC28A1O00337 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A1O00337 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A1O00337 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A1O00337 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A1O00337 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC28A1O00337 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SLC28A1O00337 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A1O00337 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A1O00337 KRT18P35-201ENST00000510488 1269 ntBASIC16.27■□□□□ 0.2
SLC28A1O00337 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A1O00337 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC28A1O00337 NKAPP1-205ENST00000585790 367 ntBASIC16.27■□□□□ 0.2
SLC28A1O00337 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
SLC28A1O00337 AL589182.2-201ENST00000619332 1049 ntBASIC16.27■□□□□ 0.2
SLC28A1O00337 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC28A1O00337 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms