Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MIR4492-201ENST00000581627 80 ntBASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC021097.1-201ENST00000607902 574 ntBASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC243562.1-201ENST00000560672 389 ntBASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC009093.7-201ENST00000623853 1223 ntBASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 KRT18P32-201ENST00000424695 1287 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RFPL4AP1-201ENST00000530883 850 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 KRT8P23-201ENST00000560090 1207 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC025678.2-201ENST00000562061 970 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL355385.1-201ENST00000606123 409 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC093028.1-201ENST00000622998 982 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC00628-201ENST00000628516 1289 ntBASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms