Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYRM9A8MSI8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYRM9A8MSI8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FZD10-202ENST00000539839 3282 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 LINC00895-201ENST00000629028 1637 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC092068.3-201ENST00000587894 2016 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 IGLL3P-201ENST00000412472 434 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC007967.2-201ENST00000432613 625 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RHOQP3-201ENST00000437982 621 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AL031432.2-201ENST00000566714 459 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AL928711.1-201ENST00000570165 459 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 MIR4515-201ENST00000584082 81 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC010507.1-201ENST00000633895 436 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AC131009.4-201ENST00000624048 1740 ntBASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LYRM9A8MSI8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 AC060834.1-201ENST00000443027 2032 ntBASIC12.04□□□□□ -0.48
LYRM9A8MSI8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.04□□□□□ -0.48
LYRM9A8MSI8 MIR574-201ENST00000385209 96 ntBASIC12.04□□□□□ -0.48
LYRM9A8MSI8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms