Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AC140878.1-201ENST00000565277 250 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AL390955.2-201ENST00000603032 514 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AC008677.1-201ENST00000519230 1561 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AC141586.5-201ENST00000624546 2050 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 AC092068.3-201ENST00000587894 2016 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 KRT8P39-201ENST00000396270 1433 ntBASIC14.75□□□□□ -0.05
MBD3L3A6NE82 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 RNA5SP421-201ENST00000516864 134 ntBASIC14.74□□□□□ -0.05
MBD3L3A6NE82 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 MIR6080-201ENST00000617359 66 ntBASIC14.74□□□□□ -0.05
MBD3L3A6NE82 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 AL139011.1-202ENST00000642063 584 ntBASIC14.74□□□□□ -0.05
MBD3L3A6NE82 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.74□□□□□ -0.05
MBD3L3A6NE82 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MBD3L3A6NE82 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms