Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
DDX49Q9Y6V7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX49Q9Y6V7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX49Q9Y6V7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 DDX43P3-201ENST00000441064 443 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AC009533.2-201ENST00000543664 586 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AC012640.2-201ENST00000561606 901 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AC006538.3-201ENST00000612495 578 ntBASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX49Q9Y6V7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AP005117.1-201ENST00000584346 1413 ntBASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 MIR940-201ENST00000401276 94 ntBASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 RPS2P1-201ENST00000434010 821 ntBASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AC116407.3-201ENST00000623905 1129 ntBASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 AC026691.1-201ENST00000602502 2017 ntBASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX49Q9Y6V7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 RNF216P1-203ENST00000404404 2427 ntBASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC092171.3-201ENST00000610122 2651 ntBASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC064862.7-201ENST00000604520 867 ntBASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 AL596257.1-201ENST00000641463 2694 ntBASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX49Q9Y6V7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms