Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 AC002056.1-201ENST00000395613 760 ntBASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 AC140658.5-201ENST00000438532 169 ntBASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 AL355385.1-201ENST00000606123 409 ntBASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB2Q9Y5E7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 AC005412.3-201ENST00000580309 715 ntBASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB2Q9Y5E7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 AC004461.1-201ENST00000412461 403 ntBASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 AC004835.2-201ENST00000603762 682 ntBASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 AD000864.1-201ENST00000624076 2295 ntBASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB2Q9Y5E7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms