Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 TSPY14P-201ENST00000303979 915 ntBASIC16.04■□□□□ 0.16
AP4S1Q9Y587 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 KRT18P48-201ENST00000434763 852 ntBASIC16.04■□□□□ 0.16
AP4S1Q9Y587 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 AP003071.4-201ENST00000562276 1284 ntBASIC16.04■□□□□ 0.16
AP4S1Q9Y587 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.04■□□□□ 0.16
AP4S1Q9Y587 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4S1Q9Y587 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.03■□□□□ 0.16
AP4S1Q9Y587 HLA-J-202ENST00000469281 1241 ntBASIC16.03■□□□□ 0.16
AP4S1Q9Y587 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4S1Q9Y587 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 AC012618.2-201ENST00000428058 849 ntBASIC16.02■□□□□ 0.16
AP4S1Q9Y587 AL390955.1-201ENST00000428694 934 ntBASIC16.02■□□□□ 0.16
AP4S1Q9Y587 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 AC233702.5-201ENST00000584107 538 ntBASIC16.02■□□□□ 0.16
AP4S1Q9Y587 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4S1Q9Y587 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms