Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AP005117.1-202ENST00000581724 1908 ntBASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 LINC00167-201ENST00000530583 1419 ntBASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AC004980.1-204ENST00000429707 299 ntBASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 LINC01023-201ENST00000606054 436 ntBASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH1Q9Y2L9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 AL359258.3-201ENST00000622910 2331 ntBASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MIR3180-5-201ENST00000583743 153 ntBASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MIR6786-201ENST00000616843 113 ntBASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms