Protein–RNA interactions for Protein: Q9UEE9

CFDP1, Craniofacial development protein 1, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1Q9UEE9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 COX5BP8-201ENST00000416911 349 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 NME2P1-201ENST00000426182 414 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 AC013467.2-201ENST00000605472 835 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 AC004233.3-201ENST00000607794 1269 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 AC008738.7-201ENST00000609744 511 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 AC006277.1-201ENST00000624348 1610 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 TUBB8P12-201ENST00000308911 1335 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 TUBB7P-202ENST00000428444 1305 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 TUBB8P7-204ENST00000567960 1332 ntBASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC25.36■■□□□ 1.65
CFDP1Q9UEE9 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 AC092053.1-201ENST00000605787 1936 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 RPL37AP1-201ENST00000412502 279 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 RN7SL692P-201ENST00000464677 288 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 HLA-J-202ENST00000469281 1241 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 NEFHP1-201ENST00000412845 2629 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 CROCCP2-202ENST00000412962 2773 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 AC087499.5-201ENST00000452760 1342 ntBASIC25.35■■□□□ 1.65
CFDP1Q9UEE9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 GOLGA2P9-201ENST00000596977 1937 ntBASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 MEIS3P1-201ENST00000495167 958 ntBASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC25.34■■□□□ 1.65
CFDP1Q9UEE9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 SNX33P1-201ENST00000592116 1762 ntBASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.33■■□□□ 1.65
CFDP1Q9UEE9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms