Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 RPSAP43-201ENST00000402237 625 ntBASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 GGTLC5P-201ENST00000617623 998 ntBASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.38■□□□□ 0.21
CUEDC1Q9NWM3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 AC104109.2-201ENST00000602919 1418 ntBASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 AC105020.1-201ENST00000435356 2205 ntBASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 GPX1P2-201ENST00000429271 606 ntBASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 OR7E47P-204ENST00000575924 449 ntBASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 MIR4751-201ENST00000578027 74 ntBASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CUEDC1Q9NWM3 AD000864.1-201ENST00000624076 2295 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 MRPL20P1-201ENST00000400819 433 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 MED15P5-201ENST00000423150 992 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AC004967.1-201ENST00000453589 447 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 Z83851.2-201ENST00000609564 659 ntBASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms