Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 LINC02012-201ENST00000608206 1725 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC52A1Q9NWF4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 KRT8P39-201ENST00000396270 1433 ntBASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SLC52A1Q9NWF4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 SNX33P1-201ENST00000592116 1762 ntBASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 RN7SL752P-201ENST00000463779 287 ntBASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 AC087289.5-201ENST00000586076 3175 ntBASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC52A1Q9NWF4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 SPDYE19P-201ENST00000338590 713 ntBASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 AL023806.1-201ENST00000603994 1649 ntBASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SLC52A1Q9NWF4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 SPDYE17-201ENST00000412399 783 ntBASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 AC011495.1-201ENST00000498085 584 ntBASIC23.86■■□□□ 1.41
SLC52A1Q9NWF4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms