Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MIR4515-201ENST00000584082 81 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 CYP2A7P1-201ENST00000595391 815 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 FAM197Y3-203ENST00000618346 717 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 MIR574-201ENST00000385209 96 ntBASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 MED15P5-201ENST00000423150 992 ntBASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 KRT18P3-201ENST00000451602 1288 ntBASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 AL139011.1-202ENST00000642063 584 ntBASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.56■□□□□ 0.88
ECHDC1Q9NTX5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 AC012569.1-201ENST00000591191 1524 ntBASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
ECHDC1Q9NTX5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 AL671710.1-201ENST00000610245 2349 ntBASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 RNA5SP416-201ENST00000516838 111 ntBASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 AP001350.2-201ENST00000625104 1094 ntBASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 AL645728.2-201ENST00000641974 660 ntBASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC1Q9NTX5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms