Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.26■□□□□ 0.83
SALL1Q9NSC2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 AC106820.2-201ENST00000563775 3264 ntBASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 AC021097.1-201ENST00000607902 574 ntBASIC20.26■□□□□ 0.83
SALL1Q9NSC2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.26■□□□□ 0.83
SALL1Q9NSC2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 MIR346-201ENST00000362234 95 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 MIR770-201ENST00000390219 98 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 AC013467.2-201ENST00000605472 835 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 Z92544.3-201ENST00000624747 417 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 AC016027.1-202ENST00000607927 1699 ntBASIC20.25■□□□□ 0.83
SALL1Q9NSC2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SALL1Q9NSC2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 AC093512.1-201ENST00000617969 520 ntBASIC20.24■□□□□ 0.83
SALL1Q9NSC2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SALL1Q9NSC2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SALL1Q9NSC2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms