Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AL022342.1-201ENST00000400363 863 ntBASIC16■□□□□ 0.15
NEUROD4Q9HD90 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AL732292.2-201ENST00000609649 430 ntBASIC16■□□□□ 0.15
NEUROD4Q9HD90 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16■□□□□ 0.15
NEUROD4Q9HD90 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 KRT8P49-201ENST00000604166 1432 ntBASIC16■□□□□ 0.15
NEUROD4Q9HD90 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NEUROD4Q9HD90 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NEUROD4Q9HD90 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 KRT18P31-201ENST00000506277 1292 ntBASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 NKAPP1-205ENST00000585790 367 ntBASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TERC-201ENST00000602385 541 ntBASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 AL355877.3-201ENST00000622820 899 ntBASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.99■□□□□ 0.15
NEUROD4Q9HD90 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 AL391256.1-201ENST00000443260 1855 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms