Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 AC074386.1-202ENST00000463561 864 ntBASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ACTL9-202ENST00000612068 1252 ntBASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF304Q9HCX3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 AC107918.2-201ENST00000530817 355 ntBASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF304Q9HCX3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms