Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 RNA5SP419-201ENST00000515908 135 ntBASIC14.83□□□□□ -0.04
CDH20Q9HBT6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 AF228730.7-201ENST00000641842 219 ntBASIC14.83□□□□□ -0.04
CDH20Q9HBT6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 AC108860.2-201ENST00000562760 2183 ntBASIC14.83□□□□□ -0.04
CDH20Q9HBT6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC046158.3-201ENST00000624947 2558 ntBASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AL590627.1-203ENST00000421194 1026 ntBASIC14.82□□□□□ -0.04
CDH20Q9HBT6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC124947.2-201ENST00000547118 1133 ntBASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC008667.4-201ENST00000607370 168 ntBASIC14.82□□□□□ -0.04
CDH20Q9HBT6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC120114.3-201ENST00000611923 658 ntBASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH20Q9HBT6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 AC108751.1-201ENST00000490852 363 ntBASIC14.81□□□□□ -0.04
CDH20Q9HBT6 MIR4751-201ENST00000578027 74 ntBASIC14.81□□□□□ -0.04
CDH20Q9HBT6 TERC-201ENST00000602385 541 ntBASIC14.81□□□□□ -0.04
CDH20Q9HBT6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.81□□□□□ -0.04
CDH20Q9HBT6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH20Q9HBT6 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.81□□□□□ -0.04
CDH20Q9HBT6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms