Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 PKD1P1-201ENST00000458669 6805 ntBASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 MTHFR-217ENST00000641820 1569 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 KRT16P4-201ENST00000453883 522 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC106795.1-205ENST00000512851 1056 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC138894.3-201ENST00000603787 634 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AL139011.1-202ENST00000642063 584 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 AC022188.1-201ENST00000620960 1664 ntBASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB1Q9H4B7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB1Q9H4B7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms