Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AC009477.1-201ENST00000452936 217 ntBASIC18.36■□□□□ 0.53
HIPK3Q9H422 KRT18P34-201ENST00000488218 1270 ntBASIC18.36■□□□□ 0.53
HIPK3Q9H422 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 TP53TG3HP-202ENST00000569755 579 ntBASIC18.36■□□□□ 0.53
HIPK3Q9H422 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIPK3Q9H422 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AC007541.1-201ENST00000570282 1469 ntBASIC18.35■□□□□ 0.53
HIPK3Q9H422 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 U91328.1-201ENST00000437528 223 ntBASIC18.35■□□□□ 0.53
HIPK3Q9H422 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 GPR53P-205ENST00000457298 1084 ntBASIC18.35■□□□□ 0.53
HIPK3Q9H422 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 AL132655.2-201ENST00000596276 594 ntBASIC18.35■□□□□ 0.53
HIPK3Q9H422 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.35■□□□□ 0.53
HIPK3Q9H422 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
HIPK3Q9H422 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK3Q9H422 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AL035456.1-201ENST00000456064 1369 ntBASIC18.34■□□□□ 0.53
HIPK3Q9H422 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 HLA-H-201ENST00000383620 1096 ntBASIC18.34■□□□□ 0.53
HIPK3Q9H422 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms