Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PCDHA12-202ENST00000613593 2588 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AL138688.1-201ENST00000624851 1594 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 HLA-DRB6-201ENST00000411500 1235 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PON3-203ENST00000427422 894 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SPCS2P4-201ENST00000436160 681 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC069335.1-201ENST00000489972 472 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NMU-203ENST00000507338 658 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC004449.1-201ENST00000564240 433 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AL135744.1-201ENST00000565098 629 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC005498.2-205ENST00000593218 784 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CEP83-AS1-201ENST00000623122 2482 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 AC129492.6-201ENST00000611383 1305 ntBASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP4-3Q9BYR4 PCDH8P1-201ENST00000428983 2773 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms