Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC104640.1-201ENST00000562617 2109 ntBASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC099063.4-201ENST00000641099 1602 ntBASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CDCA4P2-201ENST00000441182 718 ntBASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC083880.1-201ENST00000608266 535 ntBASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 AC110285.5-201ENST00000611501 352 ntBASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms