Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 AC022145.2-201ENST00000598203 171 ntBASIC13.77□□□□□ -0.21
ZNF48Q96MX3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 ADH5P3-201ENST00000433842 1137 ntBASIC13.76□□□□□ -0.21
ZNF48Q96MX3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.76□□□□□ -0.21
ZNF48Q96MX3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 CROCCP2-202ENST00000412962 2773 ntBASIC13.76□□□□□ -0.21
ZNF48Q96MX3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF48Q96MX3 AL121761.2-201ENST00000598007 1648 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 AC129492.6-201ENST00000611383 1305 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 MIR770-201ENST00000390219 98 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms