Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DUX4L27-201ENST00000554796 1261 ntBASIC16.92■□□□□ 0.3
SIPA1Q96FS4 LINC01225-203ENST00000563550 1244 ntBASIC16.92■□□□□ 0.3
SIPA1Q96FS4 U1.21-201ENST00000580816 167 ntBASIC16.92■□□□□ 0.3
SIPA1Q96FS4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 AC020916.1-201ENST00000587762 1774 ntBASIC16.92■□□□□ 0.3
SIPA1Q96FS4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIPA1Q96FS4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 PMS2P4-201ENST00000412466 1052 ntBASIC16.91■□□□□ 0.3
SIPA1Q96FS4 GPS2P2-201ENST00000430745 888 ntBASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 RNA5SP421-201ENST00000516864 134 ntBASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AC069262.1-201ENST00000539058 672 ntBASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.91■□□□□ 0.3
SIPA1Q96FS4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIPA1Q96FS4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AL021920.2-201ENST00000624828 1351 ntBASIC16.9■□□□□ 0.3
SIPA1Q96FS4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AC131009.4-201ENST00000624048 1740 ntBASIC16.9■□□□□ 0.3
SIPA1Q96FS4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AC093214.1-201ENST00000511688 1107 ntBASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 MPDU1-223ENST00000582151 728 ntBASIC16.9■□□□□ 0.3
SIPA1Q96FS4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms